MAG-QC Processes

This section contains processes related to metagenome-assembled genome quality control.

Process	Description
Aggregate Coverage	Aggregate coverage data
Aggregate DNAdiff	Aggregate DNAdiff results
Aggregate Quast	Aggregate Quast results
CheckM Coverage	CheckM coverage
CheckM SH	CheckM shell script
Contig Name Edit	Edit contig names
GTDB-Tk Get MAG Refs	Get MAG references
Parse DNAdiff	Parse DNAdiff output
Prokka Contig	Prokka annotation
Quast	Quast quality assessment
Summarize Gene Counts	Summarize gene counts
Summarize Reports	Summarize QC reports